PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv1_018470_kcda.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 477aa    MW: 52270.9 Da    PI: 6.509
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv1_018470_kcda.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.91.2e-15272318455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          hn+ Er+RRd+iN+++ +L++l+P++      K +Ka++L +++eY+k+Lq
  Bv1_018470_kcda.t1 272 VHNQSERKRRDKINQRMKTLQKLVPNS-----NKADKASMLDEVIEYLKQLQ 318
                         6*************************7.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.33E-19266327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.396268317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-18272326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-13272318IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.00E-16273322No hitNo description
SMARTSM003531.6E-17274323IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009567Biological Processdouble fertilization forming a zygote and endosperm
GO:0009506Cellular Componentplasmodesma
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    Send to blast
MNHHHCVPTW TNNLEDEIPP PPPPPSYPPL SRVLPSQSIS TSLSVGPDSS MLDYEMAELT  60
WENGQLAMHG LGLPRVSSKS NLADAVAWTD KLYTRASGTL ESIVDQAYHN QEPSPMAARR  120
GAWKHDEDDV VPWFGPKTTA PVPVTLDALV PSNNMVGCST RVESCSTAAR VPLGSDWSVS  180
VSASASASES TRKKGHAEDT CEQLRSMNNN NGFTSTSFGQ VSPENTKTFT VDEHDSACHS  240
RPQRERGEEE ENQKQGTEKS GVSTKRSRAA AVHNQSERKR RDKINQRMKT LQKLVPNSNK  300
ADKASMLDEV IEYLKQLQAQ VQMLSRMSLP SMMMPLAIQH QLQMSMMAPM GMGMGMGMGM  360
GMDQMNMSMN PMGHPNMAGM NPALMNLAAA YNMPPLAPTS DGAASRGGGD CILPQGNMVQ  420
TDPLSTYLAC QSLPMTMDAY SRMTAIYQQL QQQQTQQQQQ QQQQRLNQQQ AGPSSNI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1276281ERKRRD
2277282RKRRDK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00034PBMTransfer from AT4G00050Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010692153.10.0PREDICTED: transcription factor UNE10 isoform X2
SwissprotQ8GZ382e-75UNE10_ARATH; Transcription factor UNE10
TrEMBLA0A0J8EAG60.0A0A0J8EAG6_BETVU; Uncharacterized protein
STRINGPOPTR_0002s14430.11e-107(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.11e-69bHLH family protein